Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | EAI99_05550 | Not Available | + | 1313389 - 1314549 | 43085.3 |
| eama family transporter | EAI99_05555 | Not Available | + | 1315013 - 1315912 | 32981.4 |
| trpb-like pyridoxal phosphate-dependent enzyme | EAI99_05560 | Not Available | - | 1316067 - 1317428 | 49402.3 |
| hypothetical protein | EAI99_05565 | Not Available | - | 1317708 - 1317893 | 6603.23 |
| phenylalanine--trna ligase subunit beta | EAI99_05570 | Not Available | + | 1317971 - 1320436 | 90996.0 |
| lysoplasmalogenase | EAI99_05575 | Not Available | + | 1320520 - 1321170 | 23152.3 |
| glycosyl hydrolase family 20 | EAI99_05580 | Not Available | - | 1321307 - 1323466 | 80869.3 |
| nucleoside triphosphate pyrophosphohydrolase | EAI99_05585 | Not Available | + | 1323633 - 1324409 | 29346.4 |
| gamma carbonic anhydrase family protein | EAI99_05590 | Not Available | + | 1324513 - 1325046 | 19116.0 |
| termination factor rho | EAI99_05595 | Not Available | + | 1325072 - 1326379 | 50001.9 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.