Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes onderdonkii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes onderdonkii
Accession NumberRCXC00000000.1
Gene Summary
Adenine Count
847087 bp
Thymine Count
819146 bp
Guanine Count
1111518 bp
Cytosine Count
1145983 bp
Genome Length
3923734 bp
Protein-coding Genes
3180 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | EAI99_05045 | Not Available | - | 1193244 - 1194284 | 37301.2 |
| 4-phosphoerythronate dehydrogenase | EAI99_05050 | Not Available | + | 1194449 - 1195444 | 36550.8 |
| quinone-dependent dihydroorotate dehydrogenase | EAI99_05055 | Not Available | + | 1195499 - 1196815 | 47164.4 |
| competence/damage-inducible protein a | EAI99_05060 | Not Available | + | 1196831 - 1198072 | 44284.7 |
| cina family protein | EAI99_05065 | Not Available | + | 1198085 - 1198630 | 19373.4 |
| histidine kinase | EAI99_05070 | Not Available | + | 1198733 - 1200625 | 71400.4 |
| 50s ribosomal protein l28 | EAI99_05075 | Not Available | + | 1200754 - 1200987 | 8564.55 |
| 50s ribosomal protein l33 | EAI99_05080 | Not Available | + | 1201004 - 1201186 | 7045.72 |
| duf4295 domain-containing protein | EAI99_05085 | Not Available | + | 1201199 - 1201357 | 5902.36 |
| hypothetical protein | EAI99_05090 | Not Available | - | 1201435 - 1202352 | 33963.3 |
Pathways
18 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.