Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Genome Summary
Shewanella loihica PV-4
Accession NumberNC_009092.1
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase i | SHEW_RS00065 | Not Available | + | 12604 - 13173 | 21567.7 |
| hypothetical protein | SHEW_RS20045 | Not Available | - | 13179 - 13859 | 25365.4 |
| amidohydrolase family protein | SHEW_RS00075 | Not Available | - | 14072 - 17257 | 118098.0 |
| mosc domain-containing protein | SHEW_RS00080 | Not Available | - | 17578 - 18018 | 15578.8 |
| sulfurtransferase tusa | SHEW_RS00085 | Not Available | - | 18184 - 18429 | 9142.08 |
| cys-trna(pro) deacylase | SHEW_RS00090 | Not Available | - | 18563 - 19027 | 16743.5 |
| gnat family n-acetyltransferase | SHEW_RS00095 | Not Available | - | 19011 - 19499 | 18283.8 |
| acetyl-coa c-acyltransferase fada | SHEW_RS00100 | Not Available | - | 19854 - 21017 | 40793.8 |
| fatty acid oxidation complex subunit alpha fadb | SHEW_RS00105 | Not Available | - | 21039 - 23189 | 77148.3 |
| xaa-pro dipeptidase | SHEW_RS00110 | Not Available | + | 23495 - 24817 | 49573.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.