Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Genome Summary
Shewanella loihica PV-4
Accession NumberNC_009092.1
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | SHEW_RS00015 | Not Available | + | 111 - 1490 | 51687.7 |
| dna polymerase iii subunit beta | SHEW_RS00020 | Not Available | + | 1511 - 2611 | 40988.3 |
| dna replication/repair protein recf | SHEW_RS00025 | Not Available | + | 2684 - 3766 | 40964.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | SHEW_RS00030 | Not Available | + | 3783 - 6200 | 89784.6 |
| hypothetical protein | SHEW_RS00035 | Not Available | + | 6322 - 7041 | 26710.2 |
| 5-oxoprolinase subunit pxpa | SHEW_RS00040 | Not Available | - | 7075 - 7803 | 25761.1 |
| biotin-dependent carboxyltransferase family protein | SHEW_RS00045 | Not Available | - | 7793 - 8725 | 33711.0 |
| 5-oxoprolinase subunit pxpb | SHEW_RS00050 | Not Available | - | 8722 - 9408 | 25262.6 |
| glycine--trna ligase subunit beta | SHEW_RS00055 | Not Available | - | 9507 - 11576 | 75480.5 |
| glycine--trna ligase subunit alpha | SHEW_RS00060 | Not Available | - | 11589 - 12494 | 34416.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.