Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Genome Summary
Shewanella loihica PV-4
Accession NumberNC_009092.1
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation signal domain-containing protein | SHEW_RS00315 | Not Available | + | 74889 - 75086 | 6986.2 |
| molybdopterin-dependent oxidoreductase | SHEW_RS00320 | Not Available | + | 75104 - 77959 | 106369.0 |
| formate dehydrogenase fdh3 subunit beta | SHEW_RS00325 | Not Available | + | 77980 - 78549 | 20507.5 |
| formate dehydrogenase subunit gamma | SHEW_RS00330 | Not Available | + | 78618 - 79610 | 36965.3 |
| hypothetical protein | SHEW_RS00335 | Not Available | + | 79885 - 80250 | 13135.8 |
| type ii secretion system protein | SHEW_RS00340 | Not Available | - | 80252 - 80749 | 18156.0 |
| class ii fumarate hydratase | SHEW_RS00345 | Not Available | + | 80976 - 82355 | 49144.8 |
| hypothetical protein | SHEW_RS00350 | Not Available | - | 82400 - 83503 | 41606.1 |
| iron-containing alcohol dehydrogenase | SHEW_RS00355 | Not Available | - | 83682 - 84845 | 42254.5 |
| arac family transcriptional regulator | SHEW_RS00360 | Not Available | + | 85050 - 85916 | 32176.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.