Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Genome Summary
Shewanella loihica PV-4
Accession NumberNC_009092.1
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | SHEW_RS00265 | Not Available | - | 63788 - 64693 | 34144.2 |
| formate dehydrogenase accessory sulfurtransferase fdhd | SHEW_RS00270 | Not Available | - | 64717 - 65562 | 30658.2 |
| duf3305 domain-containing protein | SHEW_RS00275 | Not Available | + | 65858 - 66328 | 17742.1 |
| duf3306 domain-containing protein | SHEW_RS00280 | Not Available | + | 66328 - 66918 | 21528.6 |
| 4fe-4s binding protein | SHEW_RS00285 | Not Available | + | 67106 - 68776 | 60669.4 |
| molecular chaperone | SHEW_RS00290 | Not Available | + | 68787 - 69452 | 24752.4 |
| twin-arginine translocation pathway signal | SHEW_RS00295 | Not Available | + | 69620 - 69820 | 6869.1 |
| formate dehydrogenase subunit alpha | SHEW_RS00300 | Not Available | + | 69872 - 72721 | 106464.0 |
| formate dehydrogenase fdh3 subunit beta | SHEW_RS00305 | Not Available | + | 72749 - 73339 | 21227.4 |
| formate dehydrogenase subunit gamma | SHEW_RS00310 | Not Available | + | 73390 - 74397 | 36913.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.