Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Genome Summary
Shewanella loihica PV-4
Accession NumberNC_009092.1
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yigz family protein | SHEW_RS00115 | Not Available | + | 24832 - 25446 | 22298.6 |
| trkh family potassium uptake protein | SHEW_RS00120 | Not Available | + | 25599 - 27056 | 53117.1 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | SHEW_RS00125 | Not Available | + | 27056 - 27583 | 20377.5 |
| arsr/smtb family transcription factor | SHEW_RS00130 | Not Available | - | 27605 - 27910 | 11443.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | SHEW_RS00135 | Not Available | + | 28183 - 28716 | 20435.3 |
| thioesterase family protein | SHEW_RS00140 | Not Available | + | 28832 - 29368 | 21176.2 |
| glutathione s-transferase family protein | SHEW_RS00145 | Not Available | - | 29381 - 30028 | 25475.8 |
| lysr family transcriptional regulator | SHEW_RS00150 | Not Available | - | 30110 - 31009 | 33312.1 |
| dna-3-methyladenine glycosylase i | SHEW_RS00155 | Not Available | + | 31239 - 31928 | 25868.0 |
| torf family putative porin | SHEW_RS00160 | Not Available | - | 32076 - 32831 | 27296.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.