Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Genome Summary
Shewanella loihica PV-4
Accession NumberNC_009092.1
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | SHEW_RS00655 | Not Available | + | 140435 - 140890 | 16672.9 |
| tetr/acrr family transcriptional regulator | SHEW_RS00660 | Not Available | + | 140998 - 141654 | 23758.6 |
| mfs transporter | SHEW_RS00665 | Not Available | + | 141645 - 143507 | 68127.2 |
| trna 2-selenouridine(34) synthase mnmh | SHEW_RS00670 | Not Available | - | 143555 - 144673 | 41929.0 |
| selenide, water dikinase seld | SHEW_RS00675 | Not Available | - | 144673 - 145716 | 36514.3 |
| fatty acid desaturase | SHEW_RS00680 | Not Available | - | 145879 - 146985 | 43144.2 |
| hth-type transcriptional repressor fabr | SHEW_RS00685 | Not Available | + | 147128 - 147742 | 22942.8 |
| trna (uridine(54)-c5)-methyltransferase trma | SHEW_RS00690 | Not Available | - | 147823 - 148920 | 42178.4 |
| glutamate racemase | SHEW_RS00695 | Not Available | + | 149128 - 149928 | 28479.5 |
| rna recognition motif domain-containing protein | SHEW_RS00700 | Not Available | - | 149997 - 150455 | 16603.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.