Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Genome Summary
Shewanella loihica PV-4
Accession NumberNC_009092.1
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | SHEW_RS00510 | Not Available | + | 111320 - 111721 | 14614.4 |
| duf2986 domain-containing protein | SHEW_RS20210 | Not Available | + | 111823 - 111978 | 5721.02 |
| sodium/glutamate symporter | SHEW_RS00515 | Not Available | + | 112185 - 113408 | 43514.3 |
| duf333 domain-containing protein | SHEW_RS00520 | Not Available | - | 113461 - 113712 | 9038.65 |
| m14 family zinc carboxypeptidase | SHEW_RS00525 | Not Available | - | 113788 - 116325 | 94125.6 |
| fe-s biogenesis protein nfua | SHEW_RS00530 | Not Available | + | 116533 - 117111 | 20769.6 |
| mate family efflux transporter | SHEW_RS00535 | Not Available | - | 117145 - 118491 | 49044.0 |
| polysaccharide deacetylase family protein | SHEW_RS00540 | Not Available | + | 118514 - 119560 | 38938.5 |
| protein-glutamate methylesterase/protein-glutamine glutaminase | SHEW_RS00545 | Not Available | - | 119619 - 120665 | 37346.7 |
| cher family methyltransferase | SHEW_RS00550 | Not Available | - | 120694 - 121524 | 32083.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.