Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Pseudoduganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Pseudoduganella |
| Species | Pseudoduganella plicata |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoduganella plicata str. DSM 17505
Accession NumberNZ_CP038026.1
Gene Summary
Adenine Count
1031684 bp
Thymine Count
1026837 bp
Guanine Count
1915602 bp
Cytosine Count
1913499 bp
Genome Length
5887622 bp
Protein-coding Genes
5175 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1742_RS02345 | Not Available | - | 550981 - 552444 | 53519.6 |
| type vi secretion system vgr family protein | E1742_RS02350 | Not Available | - | 552444 - 555215 | 98339.6 |
| type ivb secretion system protein icmh/dotu | E1742_RS02355 | Not Available | - | 555215 - 555979 | 28043.8 |
| type vi secretion system baseplate subunit tssk | E1742_RS02360 | Not Available | - | 556039 - 557382 | 49842.3 |
| tetratricopeptide repeat protein | E1742_RS26570 | Not Available | + | 557651 - 558250 | 20781.8 |
| type vi secretion system contractile sheath small subunit | E1742_RS02370 | Not Available | + | 558357 - 558860 | 18664.3 |
| type vi secretion system contractile sheath large subunit | E1742_RS02375 | Not Available | + | 558863 - 560359 | 55023.8 |
| hcp family type vi secretion system effector | E1742_RS02380 | Not Available | + | 560403 - 560894 | 17667.9 |
| formate dehydrogenase accessory sulfurtransferase fdhd | E1742_RS02385 | Not Available | + | 560938 - 561425 | 17852.6 |
| type vi secretion system baseplate subunit tssf | E1742_RS02390 | Not Available | + | 561428 - 563272 | 68092.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.