Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Pseudoduganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Pseudoduganella |
| Species | Pseudoduganella plicata |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoduganella plicata str. DSM 17505
Accession NumberNZ_CP038026.1
Gene Summary
Adenine Count
1031684 bp
Thymine Count
1026837 bp
Guanine Count
1915602 bp
Cytosine Count
1913499 bp
Genome Length
5887622 bp
Protein-coding Genes
5175 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| propionate catabolism operon regulatory protein prpr | E1742_RS23650 | Not Available | - | 5365265 - 5366881 | 57876.4 |
| methylisocitrate lyase | E1742_RS23655 | Not Available | + | 5367043 - 5367930 | 31635.2 |
| 2-methylcitrate synthase | E1742_RS23660 | Not Available | + | 5367944 - 5369092 | 42064.4 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | E1742_RS23665 | Not Available | + | 5369116 - 5371725 | 94318.6 |
| 2-methylaconitate cis-trans isomerase prpf | E1742_RS23670 | Not Available | + | 5371725 - 5372912 | 40708.8 |
| bifunctional diguanylate cyclase/phosphodiesterase | E1742_RS23675 | Not Available | + | 5373082 - 5376375 | 121597.0 |
| exodeoxyribonuclease iii | E1742_RS23680 | Not Available | - | 5376345 - 5377109 | 28867.5 |
| hypothetical protein | E1742_RS23685 | Not Available | + | 5377512 - 5377883 | 13625.0 |
| hypothetical protein | E1742_RS26465 | Not Available | + | 5377991 - 5378569 | 20444.4 |
| duf2339 domain-containing protein | E1742_RS23695 | Not Available | + | 5378589 - 5381921 | 118649.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.