Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Pseudoduganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Pseudoduganella |
| Species | Pseudoduganella plicata |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoduganella plicata str. DSM 17505
Accession NumberNZ_CP038026.1
Gene Summary
Adenine Count
1031684 bp
Thymine Count
1026837 bp
Guanine Count
1915602 bp
Cytosine Count
1913499 bp
Genome Length
5887622 bp
Protein-coding Genes
5175 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonan acetylesterase | E1742_RS22140 | Not Available | + | 5023789 - 5025438 | 58946.7 |
| rhamnogalacturonan lyase | E1742_RS22145 | Not Available | - | 5025448 - 5027340 | 68128.2 |
| glycoside hydrolase family 105 protein | E1742_RS22150 | Not Available | - | 5027351 - 5028769 | 51735.2 |
| glycoside hydrolase family 43 protein | E1742_RS22155 | Not Available | - | 5028873 - 5029835 | 35868.4 |
| rhamnogalacturonan acetylesterase | E1742_RS22160 | Not Available | - | 5029832 - 5030923 | 39440.9 |
| rhamnogalacturonan lyase | E1742_RS22165 | Not Available | - | 5031237 - 5033087 | 66278.1 |
| duf2867 domain-containing protein | E1742_RS22170 | Not Available | + | 5033233 - 5033736 | 18212.5 |
| trna dihydrouridine(20/20a) synthase dusa | E1742_RS22175 | Not Available | + | 5033793 - 5034803 | 37782.5 |
| methyl-accepting chemotaxis protein | E1742_RS22180 | Not Available | + | 5035407 - 5037146 | 61181.5 |
| energy transducer tonb | E1742_RS22185 | Not Available | + | 5037223 - 5037555 | 11706.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.