Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shimia marina
Accession NumberCYPW00000000.1
Gene Summary
Adenine Count
837910 bp
Thymine Count
866653 bp
Guanine Count
1182103 bp
Cytosine Count
1111295 bp
Genome Length
4001860 bp
Protein-coding Genes
3862 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arc-like dna binding domain protein | SHM7688_03909 | Not Available | - | 3991989 - 3992156 | 6279.55 |
| mnt | SHM7688_03910 | Not Available | + | 3992239 - 3992565 | 12271.7 |
| hypothetical protein | SHM7688_03911 | Not Available | - | 3992598 - 3993206 | 22642.9 |
| hypothetical protein | SHM7688_03912 | Not Available | + | 3993550 - 3993651 | 3605.16 |
| hypothetical protein | SHM7688_03913 | Not Available | + | 3993645 - 3993878 | 8421.42 |
| hypothetical protein | SHM7688_03914 | Not Available | + | 3993998 - 3994372 | 14001.7 |
| transposase | SHM7688_03921 | Not Available | + | 3999995 - 4000261 | 10246.6 |
| hypothetical protein | SHM7688_03922 | Not Available | + | 4001118 - 4001615 | 17170.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.