Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dctp deaminase | SALA_RS03830 | Q1GV40 | - | 770669 - 771223 | 20614.6 |
| cytidine deaminase | SALA_RS03835 | Q9KD53 | - | 771263 - 771718 | 15513.2 |
| glycoside hydrolase family 25 protein | SALA_RS03840 | Not Available | - | 771715 - 772470 | 27643.9 |
| upf0262 family protein | SALA_RS03845 | Q1GV37 | - | 772473 - 772970 | 18936.7 |
| replicative dna helicase | SALA_RS03850 | Q9ZD08 | + | 773221 - 774732 | 55015.5 |
| giy-yig nuclease family protein | SALA_RS03855 | Not Available | - | 774827 - 775117 | 10818.2 |
| phosphoadenylyl-sulfate reductase | SALA_RS03860 | Q98GP9 | - | 775176 - 775982 | 29348.6 |
| duf934 domain-containing protein | SALA_RS03865 | Not Available | - | 776047 - 776493 | 16444.3 |
| nitrite/sulfite reductase | SALA_RS03870 | C6DCZ7 | - | 776486 - 778117 | 60547.2 |
| duf2849 domain-containing protein | SALA_RS03875 | Not Available | - | 778119 - 778415 | 10612.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.