Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | SALA_RS03675 | Not Available | - | 738816 - 739130 | 11912.3 |
| 30s ribosomal protein s16 | SALA_RS16660 | Not Available | - | 739158 - 739956 | 30023.6 |
| tetr/acrr family transcriptional regulator | SALA_RS03690 | Not Available | - | 740222 - 740827 | 21805.4 |
| crotonase/enoyl-coa hydratase family protein | SALA_RS03695 | Not Available | + | 740966 - 741661 | 24922.2 |
| glycoside hydrolase family 43 protein | SALA_RS03700 | B8NDL1 | - | 741811 - 742848 | 38217.9 |
| aldose epimerase family protein | SALA_RS03705 | Q66HG4 | - | 742845 - 743924 | 39027.5 |
| glycoside hydrolase family 43 protein | SALA_RS03710 | Not Available | + | 744038 - 745084 | 38139.9 |
| tryptophan halogenase family protein | SALA_RS03715 | P95480 | - | 745041 - 746558 | 56056.6 |
| tonb-dependent receptor | SALA_RS03720 | Not Available | - | 746639 - 749395 | 101143.0 |
| galactonate dehydratase | SALA_RS03725 | Q1R4P4 | - | 749522 - 750658 | 41545.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.