Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf47 family protein | SALA_RS03575 | O30498 | + | 721841 - 722965 | 41812.6 |
| inorganic phosphate transporter | SALA_RS03585 | O30499 | + | 723152 - 724165 | 35334.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | SALA_RS03590 | Q1GV83 | - | 724305 - 725672 | 49701.4 |
| duf1761 domain-containing protein | SALA_RS03595 | Not Available | + | 725757 - 726158 | 14176.6 |
| trka family potassium uptake protein | SALA_RS03600 | P56509 | - | 726177 - 727244 | 38322.2 |
| 5'/3'-nucleotidase sure | SALA_RS03605 | Q2NDM8 | - | 727399 - 728163 | 27382.6 |
| serine--trna ligase | SALA_RS03610 | Q1GV79 | - | 728289 - 729569 | 46591.4 |
| hypothetical protein | SALA_RS17280 | Not Available | + | 729695 - 730675 | 34733.5 |
| rna polymerase-binding protein dksa | SALA_RS03625 | P0CAU3 | + | 731379 - 731840 | 17489.4 |
| pilz domain-containing protein | SALA_RS03630 | Not Available | + | 731953 - 732318 | 13129.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.