Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS03525 | Not Available | - | 712035 - 712535 | 17480.4 |
| dna polymerase iii subunit beta | SALA_RS03530 | P0CAU5 | + | 712708 - 713823 | 40074.1 |
| sorbosone dehydrogenase family protein | SALA_RS03535 | Q44091 | - | 713929 - 715272 | 48234.6 |
| hypothetical protein | SALA_RS03540 | Not Available | + | 715452 - 715667 | 7955.35 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SALA_RS03545 | Q9A8H5 | - | 715661 - 716596 | 32807.4 |
| c40 family peptidase | SALA_RS03550 | P39043 | - | 716599 - 717519 | 32256.5 |
| m17 family metallopeptidase | SALA_RS03555 | Q3A831 | - | 717618 - 719021 | 49861.0 |
| pdac/sigv domain-containing protein | SALA_RS03560 | Not Available | + | 719077 - 719916 | 29955.4 |
| duf3008 family protein | SALA_RS03565 | Not Available | + | 719950 - 720132 | 6431.7 |
| nad(p)/fad-dependent oxidoreductase | SALA_RS03570 | A5H9N6 | - | 720136 - 721647 | 56795.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.