Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | SALA_RS03380 | Not Available | - | 684795 - 685555 | 28771.8 |
| helix-turn-helix domain-containing protein | SALA_RS03385 | Not Available | - | 685639 - 686526 | 32158.1 |
| duf885 family protein | SALA_RS03390 | Not Available | - | 686628 - 688445 | 66536.1 |
| quinone-dependent dihydroorotate dehydrogenase | SALA_RS03395 | Q1GVC1 | + | 688516 - 689586 | 36686.2 |
| gamma-glutamyltransferase | SALA_RS03400 | P54422 | + | 689668 - 691359 | 59166.0 |
| long-chain fatty acid--coa ligase | SALA_RS03405 | B2HGV4 | + | 691469 - 693274 | 66752.0 |
| hypothetical protein | SALA_RS03410 | Not Available | - | 693375 - 693821 | 15485.6 |
| hydroxyacylglutathione hydrolase | SALA_RS03415 | Q60BX0 | - | 693889 - 694632 | 26247.0 |
| voc family protein | SALA_RS03420 | Not Available | - | 694744 - 695181 | 16331.2 |
| thioesterase family protein | SALA_RS03425 | Not Available | - | 695191 - 695628 | 16571.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.