Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| murein hydrolase activator envc | SALA_RS02890 | Not Available | - | 587033 - 588250 | 42345.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | SALA_RS02895 | Q1GVM5 | - | 588247 - 588675 | 15738.9 |
| ribosome silencing factor | SALA_RS02900 | Q5NLX3 | - | 588818 - 589216 | 14099.7 |
| nicotinate-nucleotide adenylyltransferase | SALA_RS02905 | Q2N6F4 | - | 589213 - 589866 | 24922.5 |
| type ii toxin-antitoxin system rele/pare family toxin | SALA_RS02910 | Not Available | - | 589863 - 590150 | 10690.8 |
| copg family ribbon-helix-helix protein | SALA_RS02915 | Not Available | - | 590147 - 590419 | 10351.3 |
| glutamate-5-semialdehyde dehydrogenase | SALA_RS02920 | Q1GVM0 | - | 590451 - 591737 | 43928.6 |
| duf3667 domain-containing protein | SALA_RS02925 | Not Available | + | 591820 - 592956 | 41864.9 |
| crotonase/enoyl-coa hydratase family protein | SALA_RS02930 | Q589W8 | - | 593134 - 594057 | 33249.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | SALA_RS02935 | Q1GVL7 | + | 594302 - 595078 | 29357.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.