Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | SALA_RS02840 | Q1GVN6 | - | 578579 - 579637 | 38364.2 |
| 30s ribosomal protein s11 | SALA_RS02845 | Q1GVN5 | - | 579742 - 580131 | 13960.8 |
| 30s ribosomal protein s13 | SALA_RS02850 | Q1GVN4 | - | 580209 - 580577 | 13653.8 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | SALA_RS02855 | P54927 | - | 580804 - 581595 | 28200.8 |
| tldd/pmba family protein | SALA_RS02860 | P45077 | - | 581603 - 582946 | 45827.0 |
| hypothetical protein | SALA_RS02865 | Not Available | - | 582997 - 583395 | 14357.8 |
| hypothetical protein | SALA_RS02870 | Not Available | - | 583613 - 584221 | 21272.9 |
| demethoxyubiquinone hydroxylase family protein | SALA_RS02875 | Q2RNK3 | - | 584318 - 584833 | 18609.3 |
| disulfide bond formation protein b | SALA_RS02880 | Not Available | - | 584830 - 585312 | 16693.6 |
| s41 family peptidase | SALA_RS02885 | Q44879 | - | 585400 - 586788 | 49784.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.