Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS00175 | Not Available | - | 31966 - 32262 | 9345.39 |
| hypothetical protein | SALA_RS00180 | Not Available | - | 32447 - 32764 | 9581.76 |
| metalloregulator arsr/smtb family transcription factor | SALA_RS00185 | P15905 | + | 32993 - 33979 | 36223.9 |
| methylenetetrahydrofolate reductase | SALA_RS00190 | P0AEZ1 | + | 33976 - 34914 | 33555.8 |
| homocysteine s-methyltransferase family protein | SALA_RS00195 | O33465 | + | 34911 - 35978 | 37950.2 |
| methionine synthase | SALA_RS00200 | Q8DCJ7 | + | 36101 - 38722 | 96337.2 |
| hypothetical protein | SALA_RS00205 | Not Available | + | 38833 - 39786 | 33709.1 |
| ybjn domain-containing protein | SALA_RS00210 | Not Available | - | 39789 - 40295 | 18691.8 |
| accessory factor ubik family protein | SALA_RS00215 | Not Available | - | 40437 - 40757 | 11153.4 |
| tspo/mbr family protein | SALA_RS00220 | Q9GMC9 | - | 40793 - 41344 | 20085.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.