Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| low specificity l-threonine aldolase | SALA_RS02485 | O50584 | + | 513849 - 514859 | 35475.2 |
| dmt family transporter | SALA_RS02490 | Not Available | + | 514856 - 515815 | 33536.0 |
| s9 family peptidase | SALA_RS02495 | Not Available | + | 515862 - 517142 | 45398.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SALA_RS02500 | Q1GVV2 | - | 517129 - 518412 | 44765.5 |
| 2-hydroxychromene-2-carboxylate isomerase | SALA_RS02505 | Q51948 | - | 518704 - 519309 | 22056.7 |
| sdr family nad(p)-dependent oxidoreductase | SALA_RS02510 | Not Available | - | 519303 - 520034 | 25905.9 |
| helix-turn-helix domain-containing protein | SALA_RS02515 | P9WMG3 | + | 520113 - 520604 | 18182.7 |
| atp-dependent clp protease adapter clps | SALA_RS02520 | B6INJ3 | - | 520607 - 520945 | 12574.3 |
| phasin family protein | SALA_RS02525 | Not Available | - | 521166 - 521912 | 25545.8 |
| alpha/beta hydrolase | SALA_RS02530 | O66392 | - | 522038 - 523810 | 65315.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.