Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fatty acid desaturase family protein | SALA_RS02335 | Not Available | - | 476482 - 477513 | 37648.7 |
| eal domain-containing protein | SALA_RS02340 | Not Available | + | 477710 - 480298 | 93186.4 |
| quinolinate synthase nada | SALA_RS02345 | Q8DM90 | + | 480514 - 481503 | 36319.9 |
| glsb/yeaq/ymge family stress response membrane protein | SALA_RS02350 | Not Available | + | 482468 - 482731 | 9045.58 |
| glsb/yeaq/ymge family stress response membrane protein | SALA_RS02355 | Not Available | + | 482855 - 483127 | 9698.47 |
| efflux rnd transporter periplasmic adaptor subunit | SALA_RS02360 | Not Available | + | 483415 - 484608 | 41728.1 |
| efflux rnd transporter permease subunit | SALA_RS02365 | P25197 | + | 484650 - 488066 | 123363.0 |
| duf445 domain-containing protein | SALA_RS02370 | P39385 | + | 488139 - 489404 | 45639.1 |
| epimerase | SALA_RS02375 | Not Available | - | 489401 - 490189 | 27943.3 |
| aminopeptidase n | SALA_RS02380 | Q8H0S9 | + | 490236 - 492830 | 95152.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.