Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2'-5' rna ligase family protein | SALA_RS02235 | Not Available | - | 456270 - 456755 | 17826.6 |
| alpha/beta fold hydrolase | SALA_RS02240 | Not Available | - | 456968 - 457726 | 26838.4 |
| kelch repeat-containing protein | SALA_RS02245 | Not Available | - | 457723 - 458871 | 39057.9 |
| endolytic transglycosylase mltg | SALA_RS02250 | P28306 | - | 458901 - 459815 | 33078.9 |
| 30s ribosomal protein s16 | SALA_RS17270 | Not Available | + | 460626 - 461054 | 14980.7 |
| 30s ribosomal protein s16 | SALA_RS17275 | Not Available | - | 461682 - 461977 | 11142.1 |
| glutaminyl-peptide cyclotransferase | SALA_RS02265 | Q84WV9 | - | 462047 - 462814 | 28157.8 |
| chaperonin groel | SALA_RS02270 | Q1GVZ9 | - | 463029 - 464672 | 57956.1 |
| co-chaperone groes | SALA_RS02275 | A5VBQ5 | - | 464759 - 465046 | 10298.4 |
| mate family efflux transporter | SALA_RS02280 | Q98D15 | - | 465182 - 466615 | 51391.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.