Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS17705 | Not Available | - | 393531 - 393671 | 4580.73 |
| 30s ribosomal protein s16 | SALA_RS01905 | P25438 | + | 393701 - 394336 | 23567.3 |
| s1c family serine protease | SALA_RS01910 | O22609 | + | 394608 - 395678 | 37573.8 |
| hsp20/alpha crystallin family protein | SALA_RS01915 | Q4UKR8 | - | 395730 - 396230 | 18852.3 |
| hsp20 family protein | SALA_RS01920 | Not Available | - | 396334 - 396843 | 19442.8 |
| hypothetical protein | SALA_RS01925 | Not Available | + | 397236 - 398333 | 40607.4 |
| phospholipase d-like domain-containing protein | SALA_RS01930 | Q81I00 | + | 398330 - 399766 | 53148.3 |
| cation:proton antiporter | SALA_RS01935 | Q0ZAH7 | + | 399785 - 401482 | 60082.5 |
| hypothetical protein | SALA_RS16605 | Not Available | - | 401535 - 402176 | 22816.0 |
| hsp20/alpha crystallin family protein | SALA_RS01945 | Q06823 | - | 402315 - 402815 | 18324.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.