Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-phosphoglucomutase | SALA_RS01515 | Q8L164 | + | 303981 - 306941 | 105230.0 |
| tonb-dependent siderophore receptor | SALA_RS01520 | Not Available | + | 306935 - 309295 | 84380.2 |
| sugar mfs transporter | SALA_RS01525 | Not Available | + | 309459 - 310688 | 43005.2 |
| amidohydrolase family protein | SALA_RS01530 | Not Available | + | 311012 - 311851 | 30138.4 |
| iron-containing alcohol dehydrogenase | SALA_RS01535 | A4IP64 | - | 311952 - 313118 | 40143.3 |
| coce/nond family hydrolase | SALA_RS01540 | Not Available | - | 313173 - 314231 | 36369.9 |
| autoinducer binding domain-containing protein | SALA_RS16370 | Not Available | - | 314307 - 315326 | 35659.2 |
| helix-turn-helix domain-containing protein | SALA_RS01550 | Not Available | + | 315471 - 316313 | 31017.5 |
| Trna-leu | Not Available | Not Available | + | 316344 - 316430 | Not Available |
| hypothetical protein | SALA_RS01560 | Not Available | + | 316747 - 318324 | 53882.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.