Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS15995 | Not Available | + | 3300943 - 3301254 | 11553.5 |
| class ii fumarate hydratase | SALA_RS16000 | Q8KTE1 | + | 3301251 - 3302666 | 49274.9 |
| hypothetical protein | SALA_RS16005 | Not Available | + | 3302688 - 3303056 | 12650.3 |
| duf2585 domain-containing protein | SALA_RS16010 | Q1GNB5 | - | 3303136 - 3303702 | 20792.5 |
| guanylate kinase | SALA_RS16015 | Q1GNB4 | + | 3303763 - 3304425 | 24636.4 |
| thioesterase family protein | SALA_RS16020 | Not Available | - | 3304445 - 3304897 | 16395.8 |
| sdr family nad(p)-dependent oxidoreductase | SALA_RS16025 | P9WGQ6 | - | 3304899 - 3305681 | 26890.3 |
| acetyl-coa c-acetyltransferase | SALA_RS16030 | I6XHJ3 | - | 3305804 - 3306973 | 41060.4 |
| acyl-coa dehydrogenase family protein | SALA_RS16035 | P79274 | - | 3307074 - 3308228 | 42930.9 |
| smp-30/gluconolactonase/lre family protein | SALA_RS16040 | Not Available | + | 3308629 - 3309498 | 30867.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.