Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | SALA_RS15850 | Not Available | + | 3270789 - 3271334 | 20459.1 |
| urca family protein | SALA_RS15855 | Not Available | - | 3271431 - 3271787 | 12513.3 |
| btad domain-containing putative transcriptional regulator | SALA_RS15860 | Not Available | + | 3272078 - 3274363 | 83439.5 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | SALA_RS15865 | A7HSQ6 | - | 3274335 - 3275927 | 55207.8 |
| phytase | SALA_RS15870 | P42094 | - | 3276105 - 3277133 | 35264.8 |
| tonb-dependent siderophore receptor | SALA_RS15875 | Not Available | + | 3277319 - 3279676 | 87436.6 |
| hypothetical protein | SALA_RS17695 | Not Available | + | 3279688 - 3279945 | 9079.14 |
| heparinase ii/iii family protein | SALA_RS15880 | Not Available | - | 3280090 - 3281868 | 63117.0 |
| ribulose-phosphate 3-epimerase | SALA_RS15885 | O34557 | - | 3281872 - 3282543 | 23489.5 |
| aaa family atpase | SALA_RS15890 | Not Available | - | 3282829 - 3283347 | 18806.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.