Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | SALA_RS00035 | Q2N7X0 | - | 5439 - 5777 | 12273.0 |
| 50s ribosomal protein l34 | SALA_RS00040 | Q07TY4 | - | 5807 - 5941 | 5133.5 |
| pgpgw domain-containing protein | SALA_RS00045 | Not Available | - | 6043 - 6351 | 11635.6 |
| alpha/beta hydrolase | SALA_RS00050 | Not Available | - | 6735 - 7511 | 27462.2 |
| glutathione s-transferase family protein | SALA_RS00055 | Not Available | - | 7591 - 8253 | 25298.1 |
| hypothetical protein | SALA_RS00060 | Not Available | - | 8250 - 8702 | 16255.2 |
| voc family protein | SALA_RS00065 | Not Available | - | 8689 - 9192 | 17940.2 |
| voc family protein | SALA_RS00070 | Not Available | - | 9228 - 10031 | 28111.2 |
| duf6958 family protein | SALA_RS00075 | Not Available | - | 10071 - 10370 | 11200.7 |
| glutathione s-transferase family protein | SALA_RS00080 | P42761 | - | 10373 - 11044 | 24488.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.