Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | SALA_RS04775 | Not Available | - | 966467 - 967810 | 48194.9 |
| hypothetical protein | SALA_RS17070 | Not Available | - | 967807 - 968403 | 20422.6 |
| tonb-dependent siderophore receptor | SALA_RS04785 | Q47162 | - | 968400 - 970430 | 74050.5 |
| tigr03013 family xrta/pep-cterm system glycosyltransferase | SALA_RS04790 | B3FN88 | + | 970619 - 972007 | 50223.8 |
| xrta/pep-cterm system histidine kinase prsk | SALA_RS04795 | Not Available | + | 972018 - 974129 | 75192.1 |
| pep-cterm-box response regulator transcription factor | SALA_RS04800 | Q06065 | + | 974126 - 975502 | 50224.4 |
| tetratricopeptide repeat protein | SALA_RS04805 | Not Available | + | 975503 - 977344 | 64265.5 |
| gntr family transcriptional regulator | SALA_RS04810 | Not Available | - | 977505 - 977852 | 12796.4 |
| nitroreductase | SALA_RS04815 | P45244 | - | 977924 - 978505 | 20650.7 |
| peptide mfs transporter | SALA_RS04820 | A0A2R9TD79 | + | 978688 - 980271 | 56708.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.