Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | SALA_RS04725 | Not Available | + | 955581 - 956738 | 42414.5 |
| 3-hydroxybutyrate dehydrogenase | SALA_RS04730 | O86034 | + | 956765 - 957550 | 27410.9 |
| duf4893 domain-containing protein | SALA_RS04735 | Not Available | + | 957623 - 958267 | 23071.8 |
| amidohydrolase | SALA_RS04740 | Q8GGD4 | + | 958285 - 959598 | 46447.2 |
| crotonase/enoyl-coa hydratase family protein | SALA_RS04745 | O53561 | - | 959681 - 960454 | 26706.0 |
| hypothetical protein | SALA_RS04750 | Not Available | + | 960691 - 960873 | 7423.19 |
| terc family protein | SALA_RS04755 | Q1RKF1 | + | 960946 - 961932 | 36083.0 |
| isocitrate lyase | SALA_RS04760 | Q9I0K4 | - | 962080 - 963672 | 59198.9 |
| short-chain fatty acyl-coa regulator family protein | SALA_RS04765 | P9WMI0 | + | 963812 - 965200 | 49860.8 |
| hypothetical protein | SALA_RS04770 | Not Available | - | 965238 - 966263 | 37552.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.