Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SALA_RS04675 | Not Available | + | 943806 - 944207 | 14029.3 |
| hypothetical protein | SALA_RS04680 | Not Available | + | 944508 - 944816 | 11014.2 |
| urca family protein | SALA_RS04685 | Not Available | + | 944932 - 945291 | 12925.6 |
| lyttr family dna-binding domain-containing protein | SALA_RS04690 | P26275 | - | 945354 - 946085 | 27235.0 |
| sensor histidine kinase | SALA_RS04695 | Not Available | - | 946085 - 947257 | 43451.0 |
| valine--trna ligase | SALA_RS04700 | Q1GUM2 | - | 947359 - 950154 | 103822.0 |
| s9 family peptidase | SALA_RS04705 | B2RIT0 | - | 950317 - 952383 | 75332.1 |
| pilz domain-containing protein | SALA_RS04710 | Not Available | + | 952461 - 953051 | 21145.3 |
| amidohydrolase family protein | SALA_RS04715 | Not Available | - | 953089 - 954375 | 45393.1 |
| neutral zinc metallopeptidase | SALA_RS04720 | P64431 | - | 954348 - 955256 | 31966.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.