Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | + | 854471 - 854556 | Not Available |
| site-specific integrase | SALA_RS04275 | P76542 | + | 854753 - 855964 | 44127.0 |
| is21-like element helper atpase istb | SALA_RS04285 | Q99338 | - | 856522 - 857250 | 26655.2 |
| is21 family transposase | SALA_RS04290 | Q46087 | - | 857237 - 858751 | 57333.1 |
| hypothetical protein | SALA_RS04295 | Not Available | + | 858963 - 859808 | 31949.0 |
| enoyl-coa hydratase-related protein | SALA_RS04300 | P77467 | + | 859857 - 860654 | 28138.6 |
| enoyl-coa hydratase/isomerase family protein | SALA_RS04305 | Not Available | + | 860647 - 861444 | 28372.2 |
| acyl-coa dehydrogenase family protein | SALA_RS04310 | Not Available | + | 861664 - 862875 | 44638.1 |
| acyl-coa dehydrogenase | SALA_RS16410 | A0R502 | + | 862877 - 863869 | 35008.5 |
| hypothetical protein | SALA_RS04320 | Not Available | + | 864189 - 865247 | 40531.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.