Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4153 domain-containing protein | SALA_RS04220 | Not Available | + | 845077 - 846840 | 63368.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | SALA_RS04225 | Q1GUW4 | + | 846906 - 847208 | 10539.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | SALA_RS04230 | Q1GUW3 | + | 847208 - 848689 | 51843.7 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | SALA_RS04235 | Q2G4F6 | + | 848789 - 850255 | 53005.9 |
| hypothetical protein | SALA_RS04240 | Not Available | - | 850258 - 850455 | 6803.87 |
| Trna-leu | Not Available | Not Available | + | 850623 - 850707 | Not Available |
| trigger factor | SALA_RS04250 | Q1GUW1 | + | 850798 - 852408 | 58600.8 |
| dna-3-methyladenine glycosylase | SALA_RS04255 | Q92383 | - | 852556 - 853173 | 22109.3 |
| 2fe-2s iron-sulfur cluster-binding protein | SALA_RS04260 | X5CWH9 | + | 853274 - 853591 | 11317.1 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | SALA_RS04265 | P74328 | - | 853625 - 854392 | 27571.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.