Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | SALA_RS04070 | Not Available | - | 813821 - 814474 | 23073.4 |
| hypothetical protein | SALA_RS04075 | Not Available | + | 814753 - 815634 | 30370.6 |
| homoserine dehydrogenase | SALA_RS04080 | P29365 | + | 815749 - 817083 | 45654.9 |
| is5 family transposase | SALA_RS17065 | Q08082 | - | 817126 - 817883 | 28007.8 |
| bax inhibitor-1/ycca family protein | SALA_RS04095 | Q9ZE15 | - | 818229 - 818957 | 25687.9 |
| rna 2',3'-cyclic phosphodiesterase | SALA_RS04100 | O57823 | + | 819123 - 819737 | 22176.7 |
| low molecular weight protein-tyrosine-phosphatase | SALA_RS04105 | P41893 | - | 819647 - 820132 | 17040.0 |
| mfs transporter | SALA_RS04110 | Q9GQQ0 | + | 820239 - 821849 | 56053.6 |
| superoxide dismutase family protein | SALA_RS04115 | O66602 | - | 821854 - 822435 | 19561.1 |
| 30s ribosomal protein s16 | SALA_RS04120 | Not Available | + | 822995 - 823806 | 29556.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.