Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | SALA_RS04020 | P02344 | + | 806471 - 806743 | 9240.09 |
| Trna-val | Not Available | Not Available | + | 806925 - 806999 | Not Available |
| pepsy domain-containing protein | SALA_RS04030 | Not Available | + | 807098 - 807406 | 11187.8 |
| response regulator transcription factor | SALA_RS04035 | Q9I0I1 | + | 807523 - 808188 | 24481.1 |
| hamp domain-containing sensor histidine kinase | SALA_RS04040 | Q9I0I2 | + | 808373 - 809677 | 47394.9 |
| is630 family transposase | SALA_RS16675 | Not Available | - | 809791 - 810733 | 36112.0 |
| 30s ribosomal protein s16 | SALA_RS04050 | Q9HI37 | + | 810846 - 811328 | 17678.0 |
| biopolymer transporter exbd | SALA_RS04055 | B0RLE8 | - | 811857 - 812282 | 15703.2 |
| biopolymer transporter exbd | SALA_RS04060 | Not Available | - | 812315 - 812836 | 18733.5 |
| mota/tolq/exbb proton channel family protein | SALA_RS04065 | B0RLE6 | - | 812940 - 813761 | 28608.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.