Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | SALA_RS03980 | Q1GV11 | - | 797053 - 798360 | 46145.0 |
| ribose 5-phosphate isomerase b | SALA_RS03985 | P39156 | - | 798357 - 798809 | 15988.9 |
| hypothetical protein | SALA_RS17295 | Not Available | + | 798922 - 799086 | 5849.59 |
| alpha/beta hydrolase | SALA_RS03990 | Q9ZD73 | - | 799193 - 799849 | 24089.0 |
| cysteine desulfurase family protein | SALA_RS03995 | A8GNU0 | + | 799990 - 801081 | 37663.9 |
| 2fe-2s iron-sulfur cluster-binding protein | SALA_RS04000 | Q92J08 | + | 801078 - 801416 | 12204.6 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 801533 - 801630 | Not Available |
| dna polymerase iii subunit gamma/tau | SALA_RS04005 | P74876 | + | 801674 - 803371 | 60541.8 |
| ybab/ebfc family nucleoid-associated protein | SALA_RS04010 | Q46ZF8 | + | 803368 - 803703 | 11740.2 |
| endopeptidase la | SALA_RS04015 | P77810 | + | 803907 - 806303 | 87178.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.