Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coniferyl aldehyde dehydrogenase | SALA_RS03930 | Q9A777 | + | 788724 - 790178 | 52625.3 |
| ai-2e family transporter | SALA_RS03935 | O32086 | - | 790306 - 791403 | 37447.1 |
| Trna-leu | Not Available | Not Available | + | 791522 - 791606 | Not Available |
| copper resistance system multicopper oxidase | SALA_RS03945 | Not Available | + | 791648 - 793426 | 64386.2 |
| copper resistance protein b | SALA_RS03950 | Not Available | + | 793423 - 794388 | 34125.0 |
| 30s ribosomal protein s4 | SALA_RS03955 | Q1GV16 | - | 794477 - 795088 | 23151.1 |
| chorismate mutase | SALA_RS03960 | Not Available | + | 795288 - 795602 | 11557.6 |
| rna methyltransferase | SALA_RS03965 | A0A0H2ZF87 | - | 795615 - 796361 | 26429.8 |
| transcriptional regulator nrdr | SALA_RS03970 | Q1GV13 | - | 796358 - 796825 | 17697.1 |
| hypothetical protein | SALA_RS03975 | Not Available | - | 796829 - 797047 | 7512.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.