Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | SALA_RS03880 | A7MKK9 | - | 778412 - 779200 | 27092.8 |
| succinylglutamate-semialdehyde dehydrogenase | SALA_RS03885 | Q1GV29 | - | 779323 - 780768 | 51363.4 |
| alpha/beta fold hydrolase | SALA_RS03890 | Not Available | + | 780895 - 781818 | 33454.2 |
| glycosyltransferase family 4 protein | SALA_RS03895 | Not Available | + | 781815 - 782987 | 42562.6 |
| nitronate monooxygenase family protein | SALA_RS03900 | Not Available | + | 783072 - 784475 | 51823.2 |
| hypothetical protein | SALA_RS03905 | Not Available | + | 784517 - 784840 | 12271.7 |
| d-glycerate dehydrogenase | SALA_RS03910 | Q9C4M5 | - | 784880 - 785878 | 35610.2 |
| sh3 domain-containing protein | SALA_RS03915 | Not Available | + | 786005 - 786463 | 17058.5 |
| hypothetical protein | SALA_RS03920 | Not Available | - | 786695 - 787162 | 19096.7 |
| acetyl-coa c-acyltransferase | SALA_RS03925 | P45359 | - | 787380 - 788567 | 40441.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.