Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 43 protein | SALA_RS03780 | Not Available | + | 759986 - 761383 | 51512.5 |
| peptide chain release factor 3 | SALA_RS03785 | B8FGS8 | + | 761678 - 763270 | 57690.3 |
| hypothetical protein | SALA_RS03790 | Not Available | + | 763322 - 763798 | 17221.7 |
| dna polymerase iv | SALA_RS03795 | Q92XH8 | - | 764045 - 765175 | 40812.7 |
| Trna-gly | Not Available | Not Available | + | 765277 - 765350 | Not Available |
| ef-hand domain-containing protein | SALA_RS03805 | Not Available | + | 765545 - 766156 | 21770.4 |
| response regulator | SALA_RS03810 | P0AA18 | + | 766297 - 767031 | 26965.4 |
| atp-binding protein | SALA_RS03815 | Q9HZ47 | + | 767028 - 768377 | 48126.0 |
| acyl-coa thioesterase ii | SALA_RS03820 | Not Available | - | 768488 - 769288 | 28495.0 |
| trans-acting enoyl reductase family protein | SALA_RS03825 | O53176 | - | 769296 - 770468 | 41335.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.