Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2191 domain-containing protein | SALA_RS17445 | Not Available | + | 703112 - 703558 | 16250.0 |
| type ii toxin-antitoxin system vapc family toxin | SALA_RS03480 | P9WF72 | + | 703555 - 703920 | 13086.0 |
| abc transporter permease | SALA_RS03485 | Not Available | - | 703941 - 706442 | 86807.6 |
| abc transporter atp-binding protein | SALA_RS03490 | P0A9T9 | - | 706558 - 707259 | 24149.2 |
| arylesterase | SALA_RS03495 | Not Available | + | 707277 - 707990 | 24560.7 |
| ynfa family protein | SALA_RS03500 | Q1GVA0 | - | 708029 - 708352 | 11381.9 |
| outer membrane protein | SALA_RS03505 | Not Available | - | 708439 - 708897 | 15467.1 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | SALA_RS03510 | Q1GV98 | - | 709125 - 710387 | 45882.4 |
| urca family protein | SALA_RS03515 | Not Available | - | 710673 - 711002 | 11291.5 |
| lysr family transcriptional regulator | SALA_RS03520 | Not Available | + | 711153 - 712034 | 31786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.