Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | SALA_RS03430 | Q9NUJ1 | - | 695706 - 696470 | 26955.2 |
| duf6356 family protein | SALA_RS03435 | Not Available | - | 696600 - 696854 | 9568.71 |
| helix-turn-helix transcriptional regulator | SALA_RS03440 | Q57720 | - | 696926 - 697117 | 7259.75 |
| hypothetical protein | SALA_RS03445 | Not Available | - | 697114 - 697527 | 14682.4 |
| hypothetical protein | SALA_RS17060 | Not Available | - | 697531 - 697695 | 5605.14 |
| merc domain-containing protein | SALA_RS17720 | Not Available | - | 697910 - 698296 | 13677.0 |
| threonine--trna ligase | SALA_RS03455 | Q1GVA9 | + | 698389 - 700392 | 75598.7 |
| helix-turn-helix domain-containing protein | SALA_RS16395 | Not Available | + | 700389 - 701075 | 24105.6 |
| hypothetical protein | SALA_RS03465 | Not Available | + | 701085 - 702242 | 42016.5 |
| sulfite exporter taue/safe family protein | SALA_RS03470 | Not Available | + | 702284 - 703042 | 26169.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.