Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | SALA_RS16390 | Not Available | - | 677133 - 677579 | 16758.9 |
| iron-sulfur cluster assembly accessory protein | SALA_RS03335 | Q8T3X9 | - | 677582 - 677938 | 12537.7 |
| suf system fe-s cluster assembly protein | SALA_RS03340 | P70949 | - | 678090 - 678560 | 16962.2 |
| aminotransferase class v-fold plp-dependent enzyme | SALA_RS03345 | A4W9R3 | - | 678557 - 679759 | 42514.7 |
| sufd family fe-s cluster assembly protein | SALA_RS03350 | P77689 | - | 679798 - 680526 | 25316.3 |
| fe-s cluster assembly atpase sufc | SALA_RS03355 | P77499 | - | 680732 - 681475 | 26842.6 |
| gnat family n-acetyltransferase | SALA_RS03360 | Not Available | - | 681462 - 681977 | 18200.4 |
| endonuclease domain-containing protein | SALA_RS03365 | Not Available | - | 681974 - 682408 | 16127.0 |
| fe-s cluster assembly protein sufb | SALA_RS03370 | Q55790 | - | 682492 - 683979 | 55021.1 |
| suf system fe-s cluster assembly regulator | SALA_RS03375 | Not Available | - | 683984 - 684484 | 16295.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.