Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tlya family rna methyltransferase | SALA_RS00225 | P19672 | - | 41406 - 42146 | 26199.7 |
| thioredoxin family protein | SALA_RS00230 | Not Available | - | 42262 - 44328 | 72029.0 |
| alkaline phosphatase family protein | SALA_RS00235 | A1YYW7 | + | 44414 - 46099 | 59175.8 |
| pyrroline-5-carboxylate reductase | SALA_RS00240 | Q9HH99 | + | 46117 - 46947 | 27915.7 |
| marr family winged helix-turn-helix transcriptional regulator | SALA_RS00245 | P31078 | - | 46964 - 47476 | 18925.8 |
| branched-chain amino acid aminotransferase | SALA_RS00250 | O86505 | + | 47553 - 48638 | 38772.1 |
| Trna-gln | Not Available | Not Available | + | 48696 - 48770 | Not Available |
| phage integrase | SALA_RS00260 | Not Available | + | 48884 - 50962 | 77793.3 |
| yhan family protein | SALA_RS00265 | Not Available | - | 51177 - 54644 | 123146.0 |
| dna repair exonuclease | SALA_RS00270 | O07522 | - | 54644 - 55912 | 44992.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.