Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| j domain-containing protein | SALA_RS03235 | P29944 | - | 659601 - 660131 | 20171.8 |
| bola family protein | SALA_RS03240 | Not Available | + | 660272 - 660550 | 9761.48 |
| duf2200 domain-containing protein | SALA_RS03245 | Not Available | + | 660559 - 660927 | 13872.8 |
| pirin family protein | SALA_RS03250 | P58114 | + | 660947 - 661831 | 32088.2 |
| alpha/beta fold hydrolase | SALA_RS03255 | O31581 | + | 662045 - 662968 | 33189.5 |
| hypothetical protein | SALA_RS03260 | Not Available | - | 663054 - 663476 | 14725.6 |
| serine hydrolase | SALA_RS03265 | Not Available | + | 663475 - 664632 | 40867.9 |
| phzf family phenazine biosynthesis protein | SALA_RS03270 | Q9I073 | - | 664627 - 665448 | 29125.4 |
| pyridoxamine 5'-phosphate oxidase | SALA_RS03275 | Q1GVE7 | - | 665445 - 666023 | 21750.4 |
| dnaj c-terminal domain-containing protein | SALA_RS03280 | P50027 | + | 666155 - 667072 | 31795.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.