Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dopa 4,5-dioxygenase family protein | SALA_RS03090 | Not Available | + | 625299 - 625709 | 14232.5 |
| atp phosphoribosyltransferase regulatory subunit | SALA_RS03095 | Q2W2D0 | - | 625673 - 626785 | 39138.8 |
| phosphoglycerate dehydrogenase | SALA_RS03100 | P73821 | - | 626996 - 628582 | 56348.3 |
| phosphoserine transaminase | SALA_RS03105 | Q8TNI1 | - | 628726 - 629853 | 40668.3 |
| extensin family protein | SALA_RS03110 | Not Available | + | 630026 - 630727 | 25009.8 |
| log family protein | SALA_RS03115 | Not Available | + | 630889 - 631764 | 32792.0 |
| cytochrome c family protein | SALA_RS03120 | P00039 | - | 631946 - 632389 | 14945.0 |
| cytochrome c family protein | SALA_RS03125 | P00038 | - | 632389 - 633027 | 21075.7 |
| prephenate dehydratase | SALA_RS03130 | Q9SSE7 | + | 633209 - 634102 | 31928.1 |
| cdp-alcohol phosphatidyltransferase family protein | SALA_RS03135 | Not Available | - | 634108 - 634782 | 24672.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.