Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr02186 family protein | SALA_RS03040 | Not Available | + | 613866 - 614639 | 28459.8 |
| atp-binding protein | SALA_RS03045 | Q8U1P0 | + | 614727 - 616436 | 61924.8 |
| voc family protein | SALA_RS03050 | Not Available | - | 616832 - 617224 | 14451.8 |
| cell wall hydrolase | SALA_RS03055 | Not Available | - | 617263 - 618393 | 40162.9 |
| hypothetical protein | SALA_RS03060 | Not Available | - | 618574 - 619089 | 18925.5 |
| ribosome maturation protein rimp | SALA_RS03065 | Q1GVJ2 | + | 619301 - 619846 | 19543.0 |
| transcription termination factor nusa | SALA_RS03070 | Q92HF4 | + | 619846 - 621492 | 60413.4 |
| duf448 domain-containing protein | SALA_RS03075 | Not Available | + | 621473 - 622231 | 26808.7 |
| translation initiation factor if-2 | SALA_RS03080 | Q1GVI9 | + | 622249 - 624786 | 91060.9 |
| 30s ribosome-binding factor rbfa | SALA_RS03085 | Q1GVI8 | + | 624839 - 625249 | 15347.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.