Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | SALA_RS02790 | Q9KQH7 | - | 569650 - 570342 | 24541.4 |
| methyl-accepting chemotaxis protein | SALA_RS02795 | Q2W4T8 | - | 570490 - 571842 | 48128.7 |
| lrp/asnc family transcriptional regulator | SALA_RS02800 | P50337 | - | 571943 - 572410 | 16787.3 |
| alanine dehydrogenase | SALA_RS02805 | E1V931 | + | 572566 - 573681 | 39262.3 |
| hypothetical protein | SALA_RS02810 | Not Available | + | 573703 - 573936 | 8045.37 |
| fmn-dependent nadh-azoreductase | SALA_RS02815 | Q28UD5 | - | 574015 - 574611 | 20942.9 |
| pirin-like bicupin family protein | SALA_RS02820 | Q9I4C8 | - | 574726 - 575424 | 25221.4 |
| lysr family transcriptional regulator | SALA_RS02825 | Not Available | + | 575672 - 576607 | 32590.5 |
| response regulator transcription factor ctra | SALA_RS02830 | P0CAW8 | + | 576804 - 577511 | 26509.2 |
| 50s ribosomal protein l17 | SALA_RS02835 | Q1GVN7 | - | 577905 - 578324 | 15414.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.