Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | SALA_RS02735 | Q9A6U9 | + | 559479 - 560273 | 29928.4 |
| dna repair protein recn | SALA_RS02740 | Q9PB02 | + | 560306 - 561976 | 57854.8 |
| gnat family n-acetyltransferase | SALA_RS02745 | Not Available | + | 561973 - 562659 | 24352.5 |
| endonuclease domain-containing protein | SALA_RS16630 | Not Available | + | 562791 - 563105 | 11610.8 |
| nad-dependent dna ligase liga | SALA_RS02755 | Q1GVQ2 | + | 563107 - 565251 | 77533.2 |
| molybdate abc transporter substrate-binding protein | SALA_RS02765 | Q8PHA1 | + | 565595 - 566359 | 26101.9 |
| molybdate abc transporter permease subunit | SALA_RS02770 | P0AF02 | + | 566359 - 567054 | 24742.0 |
| atp-binding cassette domain-containing protein | SALA_RS02775 | Q98KI3 | + | 567044 - 567664 | 22681.5 |
| phenylalanine 4-monooxygenase | SALA_RS02780 | Q9A7V7 | + | 567703 - 568572 | 32371.3 |
| 50s ribosomal protein l11 methyltransferase | SALA_RS02785 | B0CHK5 | - | 568678 - 569649 | 34512.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.