Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis alaskensis |
| Strain | RB2256 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Oligotroph - Heterotroph |
| Pathogenicity | No |
Genome Summary
Sphingopyxis alaskensis RB2256
Accession NumberNC_008048.1
Gene Summary
Adenine Count
579938 bp
Thymine Count
574094 bp
Guanine Count
1094262 bp
Cytosine Count
1096876 bp
Genome Length
3345170 bp
Protein-coding Genes
3231 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| group iii truncated hemoglobin | SALA_RS02685 | Not Available | - | 550335 - 550820 | 17669.3 |
| rrf2 family transcriptional regulator | SALA_RS02690 | A7ZV48 | + | 550902 - 551333 | 15032.3 |
| abgt family transporter | SALA_RS02695 | P46133 | - | 551353 - 552942 | 55786.0 |
| thymidine kinase | SALA_RS02700 | Q2G5F0 | + | 553000 - 553593 | 21673.9 |
| gnat family n-acetyltransferase | SALA_RS02705 | Not Available | + | 553586 - 554122 | 19772.5 |
| duf6491 family protein | SALA_RS02710 | Not Available | + | 554211 - 554615 | 14568.1 |
| trna pseudouridine(55) synthase trub | SALA_RS02715 | Q2G5F3 | + | 554649 - 555605 | 33531.3 |
| 30s ribosomal protein s15 | SALA_RS02720 | Q1GVQ9 | + | 555631 - 555900 | 10318.6 |
| polyribonucleotide nucleotidyltransferase | SALA_RS02725 | Q1GVQ8 | + | 556093 - 558408 | 83530.8 |
| peptidylprolyl isomerase | SALA_RS02730 | O53021 | + | 558688 - 559392 | 24364.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.